CDS

Accession Number TCMCG016C17664
gbkey CDS
Protein Id OMO70644.1
Location join(22227..22583,22698..22799,22906..23076,23177..23298,23690..23809,24012..24300)
Organism Corchorus capsularis
locus_tag CCACVL1_18738

Protein

Length 386aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011780.1
Definition Zinc finger, RING/FYVE/PHD-type [Corchorus capsularis]
Locus_tag CCACVL1_18738

EGGNOG-MAPPER Annotation

COG_category O
Description Mitochondrial ubiquitin ligase activator of NFKB
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K15688        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000266        [VIEW IN EMBL-EBI]
GO:0001558        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005741        [VIEW IN EMBL-EBI]
GO:0005777        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006919        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0010950        [VIEW IN EMBL-EBI]
GO:0010952        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019867        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030308        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031300        [VIEW IN EMBL-EBI]
GO:0031301        [VIEW IN EMBL-EBI]
GO:0031306        [VIEW IN EMBL-EBI]
GO:0031307        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031968        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032592        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0042579        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043065        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043122        [VIEW IN EMBL-EBI]
GO:0043123        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043280        [VIEW IN EMBL-EBI]
GO:0043281        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044455        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0045926        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051646        [VIEW IN EMBL-EBI]
GO:0052547        [VIEW IN EMBL-EBI]
GO:0052548        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0098573        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902533        [VIEW IN EMBL-EBI]
GO:2000116        [VIEW IN EMBL-EBI]
GO:2001056        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCTCTTACGATCAAGCCCTAGCTTCCTTAATTTCACAAATAGCATTTTCCTTCGACGGTGCCGTCTTAGGTGTTGCCCTAGCCTATGCCGCTGTTCGCACAATCTTCCGCTTCAAGTGCACCTCCACCGCCCTCCGCAAAATTGGTGGTGCTCCGTCCGTACGCGTCGCCGACCTTCGTTCCCTTCTCGAAGAGGAACGTTCTAATTCAACCGAAGAACCTATTGTCGTAGTTCGCGGCGCCGTCGAGGCGAGACCGGCCACCGATGGGCTAAGCTGGAAGGGCCTCAAAAGTAATGTGCTTGTCTCTCAAGAGTCCGGTGATAAAGCTGTTATTATCCAAAGATCACAAACTTATATTTACCATGAATGGAGGGGGTTTTTGGGATGGACTTCTGATTTACGTTCAATTCTGGGAAGATCTTGGACCAAAAAAGAGTCATCTACAATGAAGACGGTTCCTTTCATTCTGGTTGAAGGCGGTAAATGGCCGCAATCAGATTCTGTCATTGTGAACATGGATGGCTCAAGGCATCCCCTGCCTCTTACTACTGTTTATCATCAATTGCAGCCTATCAATGCTTCTCCTTATACCTTGCTTCAGGCTTTGTTTGGTCATGAATACCCTGTTGGTCTGCTTAATGAAGAGAAAATTCTTCCCTTGGGAAAGGAAATCACTGCTGTTGGCATTTGCGGTTTCAATAATGGAGTGCCTGAACTCAAGTCATGCAAGGAGCTTCCTTATTTTCTTTCTGACAAGACAAAGGATCAGATGTTGCTAGATCTTGCCTTCAAGACAAAAATACTATTGTGGAGTGGTGTCGTCTTTGGTTCACTGTCTATTGGTATCCTTGGCTATGCTTTTGTGAGGAATTGGAAAAAATGGAAAGAATGGCGACAAAGACGAGCTCAGCAATCAATCCAAGCTATCACTGATGAAGCCACCTCTGAGATTACTGTGGATGAGGACGCAGGTGACATTCCGGACGGGGAGTTGTGCGTTGTCTGCTTGATGAGGAGAAGACGATCTGCATTTATTCCATGTGGGCACCTAGTTTGCTGCCAACGTTGTGCTATTTCAGTAGAACGGGAAGTGATGCCGAAATGTCCTGTTTGTCGCATGTCAATCCGCAGTTCAGTGCGGATATATGCATCGTAA
Protein:  
MSSYDQALASLISQIAFSFDGAVLGVALAYAAVRTIFRFKCTSTALRKIGGAPSVRVADLRSLLEEERSNSTEEPIVVVRGAVEARPATDGLSWKGLKSNVLVSQESGDKAVIIQRSQTYIYHEWRGFLGWTSDLRSILGRSWTKKESSTMKTVPFILVEGGKWPQSDSVIVNMDGSRHPLPLTTVYHQLQPINASPYTLLQALFGHEYPVGLLNEEKILPLGKEITAVGICGFNNGVPELKSCKELPYFLSDKTKDQMLLDLAFKTKILLWSGVVFGSLSIGILGYAFVRNWKKWKEWRQRRAQQSIQAITDEATSEITVDEDAGDIPDGELCVVCLMRRRRSAFIPCGHLVCCQRCAISVEREVMPKCPVCRMSIRSSVRIYAS